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Bio-IT World Review: BIG Data; BIG Promise; BIG CHALLENGES.

Earlier this week,  I had the privilege of attending the tenth annual “BIO-IT World Conference and Expo,” at which some 2500  information technology professionals participated in a 12-track program featuring more than 200 presentations on scientific and technologic developments.

From  keynote speakers Jill Mesirov, PhD, and Martin Leach, PhD,  respectively the Associate Director and Chief Information Officer  of the Harvard-MIT Broad Institute,  I learned that exponential increases  in computing power promise to bring personalized medicine –allowing highly individualized diagnosis and treatment –to doctors offices within ten years. I also learned how hard it is to keep track of the petabytes  ( a PBs is a unit of information equal to one quadrillion  bytes, or 1024 terabytes )  used to keep it all going.

Mesirov announced the upcoming launch of “Genome Space“–a new Web-based technology to help scientists make sense of and collaborate in using such data.

And in a talk entitled “BIG,”  Leach described the difficulty of defining “big data,” because the amount of available information is growing so rapidly.   He described an event held recently at the Broad to celebrate the Institute’s ability to store and analyze ten pedabytes of data –his glee soon tempered by  his recollection that in 1993, NIH’s Institute of Medicine was thrilled with its ability store 16 gigabytes–which anyone can now do on a cell phone.

Today,  Leach said, we are  seeing “increasing big data with a decreasing footprint.” [that is, smaller systems needed for gathering and retrieval].

Mentioning that he has an autistic son and would like to be able to figure out what causes the disorder, Leach  asked, “Why is there no Google search for data, no way to access thousands of data repositories?

“We need a new application ecosystem and a breed of data scientist who knows how and where to push this data, ” he said.  He predicted that there will soon be 50 thousand jobs in the  “big data” arena.

In the exhibit hall,  I was pleased to see that  see that Wingu, headquartered in the Cambridge Innovation Center, where I work, had been nominated for a best of show award for its pharmaceutical, contract research and academic collaboration software.

The winners, announced last night, were Recentris, Opscode, Clear Trial, and Cambridge Semantics. [More info at http://www.bio-itworld.com/2012/04/26/2012-best-of-show-winners.html]. Best Practice Grand Prizes went to big Pharma: Merck, Pfizer, and Merck KGaA (Germany)  went to and two genomics organizations, BGI Shenzhen and the University of Utah/Omicia. http://www.bio-itworld.com/2012/04/25/bio-it-world-announces-winners-2012-best-practices-awards.html.

BIO-IT World is sponsored by  Insight Pharma Reports, Samsung, and the Portland Group. It runs through April 27, 2012.

—Anita M. Harris

 




Lab tests for a dime at the convenience store?

Earlier this month, in Kendall Square, two entrepreneurs described new medical devices designed to provide low-cost “point-of-care” tests-far from laboratories or medical centers in the developing world.

Speaking at a meeting of  Health Care and Life Science Special Interest Group of the MIT Enterprise Forum at the British Consulate  former Mass Biotechnology Council  President Una Ryan described the paper-based  medical testing technology that her new nonprofit enterprise,  Diagnostics for All (DFA), has licensed from the George Whitesides Laboratory at Harvard.

The technology allows bodily fluid to accumulate in patterns on postage-stamp sized pieces of paper–to be used for  multiple  tests simultaneously. DFA’s first project, funded in part by the Bill and Melinda Gates Foundation, is a liver function test to monitor the effects of drugs for HIV/AIDS and tuberculosis, and  to help manage viral hepatitis.  The test kits will first be sold in convenience stores in Africa at a cost of approximately ten cents each, Ryan said.

Bill Rodriguez, CEO of Daktari Diagnostics, showed a handheld, point of care, battery-operated diagnostics device the size of a small lunch box or portable radio that will first be used to test for AIDS in Africa–at a cost of $1.50 per test–starting next year. He pointed out that while drugs are available to treat the  33 million people worldwide who have  HIV– “ten million of them don’t know it.”

Scientia Advisors Partner Arshad Ahmed, who  served as moderator, (and is my client) pointed out in a recent blog that emerging markets may have the opportunity to adopt the latest point-of-care products, leapfrogging developed countries, in some instances–and that “emerging markets are where we will see the first application of low cost and inovative disruptive technologies at work.” Launching in the developing world allows companies to test out and market technologies before going through the rigorous approval process required in the developed world.

I was blown away by the prospects for  devices like these. I asked when and how they will affect the  costs and structure of, say, US healthcare–and whether those who make and market our costly technologies will try to keep these new testing devices from our marketplace. Ryan, whose nonprofit, DFA, will have a commercial wing, responded that she does not expect opposition from stakeholders in our current system. And a marketer for the device and pharma industries was adamant that  developments like these will not impact her customers–for many years,  at least.  Given the vicissitudes of the US regulatory system and financeers needs for ROI, that may well be true.

But, clearly,  technologies like these have tremendous potential to transform health care–and I’m excited at their prospects– for the long-neglected developing world.

—Anita M. Harris

Anita M. Harris is President of the Harris Communications Group, a marketing and public relations firm specializing in health, science and technology industries, worldwide.




Nine-Day Cambridge Science Festival Showcases City’s Tech Prowess

The Cambridge Innovation Center and quite a few companies will be holding open houses this Thursday in Kendall Square, Cambridge–as part of the nine-day Cambridge Science Festival.

Billed on its Web site as “the first of its kind in the nation,”  the annual Festival opened on Saturday, April 24, to showcase  Cambridge as an internationally recognized leader in science, technology, engineering and math.  A multifaceted, multicultural event held every spring, the Cambridge Science Festival makes science accessible, interactive and fun.

A myriad of events–ranging from talks and panel discussions to demonstrations, luncheons, museum exhibits, elementary school science fairs  and company open houses–are listed at the  Festival’s Schedule of Events.

I expect to be at the Cambridge Innovotion Center open house at 1 Broadway  on Thursday evening–as will my client, InVivo Therapeutics, and   Vitality, Seeding Labs, Acorn Product Development,   HubSpot and other companies.   The Venture Cafe, on the 11th floor,  will be open to the public  from 6-9 pm.

Also on Thursday evening, Microsoft’s NERD Center, Google, VMware, and the Singapore-MIT GAMBIT Game Lab will hold open houses.  
The Festival is sponsored  by MIT, Pfizer, and the city of Cambridge.
–Anita M. Harris
New Cambridge Observer is published by the Harris Communications Group of Cambridge, MA. We also publish HarrisCom Blog and Ithaca Diaries Blog. 



Cambridge Seeks Citizen Input on Future Tech Needs

Having completed an excellent three-evening course on Dreamweaver  just this week at Cambridge Community Television in Central Square,  I urge Cantabridgians to take part in one of the focus groups to be conducted in early October–all related to the Cambridge’s technology future  and the role of Comcast, which, by law, sponsors CCTV, in the community.

Here’s the info–lifted in its entirety, I confess–from an email CCTV sent to me yesterday.

 

* Have you ever watched Cambridge City Council or School Committee meetings, school sports, Democracy Now! or BeLive?
* Have you ever wanted to engage in a community dialogue about important issues in Cambridge?
* Would you like to share your ideas about how our community can use our local cable channels?

The City of Cambridge is seeking participants for a series of workshops on the future of cable service, community media and technology.

You are encouraged to participate, propose new ideas for consideration and help us explore the opportunity we have right now for the City to provide new technological resources to all communities within Cambridge.

Six focus group workshops will be held at Cambridge locations listed below. The presentation of each workshop will be identical, but discussions will focus on different aspects of community life. Choose one based either on your interest or your schedule.

* Participation is free and open to the public.
* Registration is required by Friday, Sept. 25, 2009:  – via telephone to 617-349-4302 (if leaving voice mail, include name, organization, address, phone, email, and which focus group you are attending
– or register online
here.

Local Government Departments and Agencies
October 6, 2009
10:00 am – Noon
City Hall Annex
344 Broadway
 
Health/Human Service/Social Service Organizations and Agencies
October 6, 2009
2:00 – 4:00 pm
City Hall Annex
344 Broadway
 
Senior Citizens and Organizations Serving Seniors
October 7, 2009
10:00 am – Noon
Central Square Library
45 Pearl Street
 
Nonprofit, Civic, Community, and Faith Based Organizations
October 7, 2009
6:30 – 8:30 pm
Media Arts Studio
454 Broadway
 
Arts/Culture/Heritage Organizations
October 8, 2009
10:00 am – Noon
Media Arts Studio
454 Broadway
 
Educational Institutions, Educators, and Youth
October 8, 2009
4:00 – 6:00 pm
Media Arts Studio
454 Broadway
 
The City of Cambridge and its municipal channel, CITY TV-8, have teamed up with community partners CCTV (Cambridge Community Television, Channels 9 & 10) and CEA (Cambridge Educational Access, Channels 98 & 99) to coordinate this process to identify the community’s needs and interests in future technologies.  The focus groups will be conducted by The Buske Group, a nationally recognized public policy consulting firm hired specifically to help the city with the cable license renewal process.For more information, visit CCTV’s website or call 617-349-4302.

New Cambridge Observer is a publication of the Harris Communications Group of Cambridge, MA. We also publish Harriscomblog.